Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05271

Metabolite ID
P05271
Deionized mass
396.1936 Da
Average m/z
397.2027
Average RT
8.6865
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G303400 hypothetical protein NA 2Chr08:42139097–42147365 (+)1.272e-11
Glyma.16G138800 hypothetical protein NA 2Chr16:29609432–29615000 (+)1.21e-12
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)8.962e-16
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.391e-13
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.439e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.957e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.457e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)5.677e-11
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)1.272e-11
Glyma.08G303800 hypothetical protein AT2G43020:PAO2:polyamine oxidase 2 1Chr08:42174238–42179859 (-)1.898e-11
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)4.195e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.828e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)1.98e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.699e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.206e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.699e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.699e-14
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.034e-14
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.141e-13
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)5.361e-15
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)6.026e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.962e-16
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.833e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.585e-18
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)4.419e-11
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)4.419e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.158e-11