Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05237

Metabolite ID
P05237
Deionized mass
186.1050 Da
Average m/z
187.1130
Average RT
8.6646
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G064100 hypothetical protein NA 4Chr16:6322034–6325343 (-)1.114e-13
Glyma.16G137600 hypothetical protein NA 4Chr16:29468438–29472890 (-)1.334e-16
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.922e-12
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)6.098e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.126e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.126e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.982e-12
Glyma.16G066900 hypothetical protein NA 2Chr16:6636803–6639454 (+)1.171e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.501e-11
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)8.119e-17
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.922e-12
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)4.959e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.072e-15
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.707e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.968e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.603e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.632e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.632e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.488e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.549e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.549e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.549e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.351e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.246e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.686e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.252e-16
Glyma.05G237500 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 1Chr05:41383632–41394607 (+)5.756e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.299e-23
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.079e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.079e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)1.809e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)1.809e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.658e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)2.338e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.338e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.702e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.716e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)9.875e-12
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)8.618e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)8.618e-11
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)5.267e-11
Glyma.13G068200 hypothetical protein AT5G14940:AT5G14940:Major facilitator superfamily protein 1Chr13:16825383–16836935 (+)3.749e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.317e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.317e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.126e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.14e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.958e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.982e-12
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)2.757e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.076e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.376e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)6.818e-12
Glyma.16G062500 hypothetical protein NA 1Chr16:6099546–6105267 (-)5.111e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.501e-11
Glyma.16G137800 hypothetical protein NA 1Chr16:29480352–29487400 (-)2.774e-12
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)1.39e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.041e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)7.412e-16
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)2.573e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.609e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)9.473e-13
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)2.434e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.013e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.013e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.966e-11
Glyma.16G160200 hypothetical protein NA 1Chr16:31969869–31972840 (+)2.582e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.918e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.026e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.547e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.088e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)2.953e-13
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)3.886e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)3.886e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)6.178e-14
Glyma.18G252000 hypothetical protein AT1G02100:SBI1:Leucine carboxyl methyltransferase 1Chr18:53874840–53885068 (-)2.613e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)4.39e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.398e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.398e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.463e-12
Glyma.20G103800 hypothetical protein AT3G59040:AT3G59040:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:34643077–34647277 (+)1.289e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.595e-11