SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 8 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09584 Stereospermoside 526.1706 28.451e-11
P09728 No candidate annotation 282.1536 26.155e-14
P09940 Serdexmethylphenidate 499.1991 21.388e-15
P09972 Brachystemidine C 322.1136 27.251e-14
P09978 Chrysophanol 1-tetraglucoside 902.2773 25.436e-12
P10028 Ilepatril 432.1728 23.68e-14
P10043 No candidate annotation 547.5963 21.327e-15
P10082 Trifuhalol B 390.0587 24.962e-17
P10128 Fisetinidol-(4alpha->8)-catechin-3-O-gallate 714.1623 21.452e-14
P10281 Undeca-2,4,6-trienedioyl-CoA 959.2076 21.567e-17