Overview Annotation GWAS Evidence Associated genes

P09728

Metabolite ID
P09728
Deionized mass
282.1536 Da
Average m/z
283.1610
Average RT
10.2420
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
155
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

155 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.663e-15
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)1.275e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.219e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)4.124e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.561e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.554e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)2.567e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.698e-15
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.66e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.66e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.66e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.738e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)8.955e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)8.393e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.174e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.744e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.428e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.949e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)6.155e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.663e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.042e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.368e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)6.861e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.105e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.314e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)9.336e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.047e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.683e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)6.207e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.566e-15
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)8.87e-15
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.557e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)6.533e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.896e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.203e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.203e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.141e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.694e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.694e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.694e-15
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.989e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.809e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)8.562e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.499e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.013e-15
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.141e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.022e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.483e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.483e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.483e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)8.548e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.909e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.663e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.909e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.909e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.663e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.559e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.698e-15
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.698e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.698e-15
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.698e-15
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)9.119e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)6.533e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)6.533e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.137e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.455e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.91e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.437e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.549e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.615e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.855e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.66e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.66e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.66e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.659e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.659e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.821e-12
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)8.434e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.643e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.643e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.643e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.643e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.424e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.042e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.643e-16
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.644e-16
Glyma.12G109600 hypothetical protein AT4G03420:AT4G03420: 1Chr12:10403574–10408026 (+)1.783e-11
Glyma.12G109700 hypothetical protein AT1G03620:AT1G03620:ELMO/CED-12 family protein 1Chr12:10419034–10424716 (-)1.783e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.608e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.608e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.28e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.28e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.439e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.688e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.174e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.7e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.353e-11
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)3.529e-11
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)3.587e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.342e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.744e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.056e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.056e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.056e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.838e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.839e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.839e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.36e-13
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)3.084e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)3.084e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.269e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.133e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.133e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.906e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.239e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.906e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.906e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.243e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.492e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.776e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.949e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.728e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)2.736e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.219e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.219e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.219e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.219e-13
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.538e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)9.118e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.561e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.561e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.035e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.787e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.166e-12
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)5.535e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.083e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.554e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.439e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.439e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.008e-12
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)1.425e-11
Glyma.18G110500 hypothetical protein NA 1Chr18:13060060–13070455 (+)9.491e-12
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)8.405e-14
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.314e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)9.268e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)4.664e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)3.285e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)4.316e-12
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 1Chr19:45183357–45185175 (-)7.478e-11
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 1Chr19:45201612–45206816 (+)7.478e-11
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 1Chr19:45215929–45223182 (+)7.478e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.126e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.568e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)8.044e-11