Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09584

Metabolite ID
P09584
Deionized mass
526.1706 Da
Average m/z
527.1797
Average RT
10.1949
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.72e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)6.852e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.147e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.147e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.42e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)8.451e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)1.837e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)1.222e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)3.316e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.128e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)4.662e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.792e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.792e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)7.003e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)7.003e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)7.003e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.52e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.52e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.004e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.004e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.147e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.147e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.346e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)6.649e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.556e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.42e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.312e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.307e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.996e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.344e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)2.807e-14
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)1.123e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)4.282e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.109e-17
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.109e-17
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)9.128e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.551e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)7.158e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.69e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.69e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)1.837e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.104e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.029e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.029e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.259e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.752e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.264e-11