Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10128

Metabolite ID
P10128
Deionized mass
714.1623 Da
Average m/z
715.1713
Average RT
10.3632
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.032e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.759e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)6.092e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)7.371e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)1.042e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.016e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.075e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.286e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)8.304e-13
Glyma.16G111100 hypothetical protein NA 2Chr16:24438458–24444801 (+)1.032e-14
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 2Chr16:24720965–24731678 (-)6.18e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.452e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.092e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.388e-15
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)9.391e-12
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)5.077e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)9.619e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.999e-12
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)2.779e-11
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)2.779e-11
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)2.779e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)4.59e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.494e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.199e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.661e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.083e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.083e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.083e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.362e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)3.082e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.052e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)3.082e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)3.082e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.052e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.185e-14
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)3.721e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)3.721e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.576e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)4.189e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)5.327e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)5.327e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.256e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.256e-11
Glyma.09G148600 hypothetical protein AT5G51890:AT5G51890:Peroxidase superfamily protein 1Chr09:36761818–36764607 (+)2.365e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.957e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.957e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.957e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.957e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.047e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.911e-15
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.658e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.286e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.286e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.759e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)8.437e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.384e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)8.217e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.217e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.797e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.885e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.797e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.797e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.526e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.224e-11
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 1Chr16:24455709–24466236 (+)8.007e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)8.438e-14
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)5.6e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.386e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)2.782e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)6.092e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)6.092e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.093e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.305e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)8.237e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)5.399e-11