SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 292 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52185 Reproterol 389.1693 15.053e-12
P52199 Benzobicyclon 446.0355 19.495e-12
P52242 Eutreptiellanone 562.3806 18.872e-12
P52281 Albovionitine 389.2567 16.929e-12
P52344 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1228 14.565e-13
P52360 Geijedimerine 454.1925 12.834e-11
P52372 cis-5-Tetradecenoylcarnitine 369.2922 18.515e-12
P52388 No candidate annotation 733.9768 14.931e-12
P52437 No candidate annotation 861.3671 12.363e-12
P52467 Oxiracetam 158.0666 14.329e-12