P52199
Metabolite ID
P52199
Deionized mass
446.0355 Da
Average m/z
447.0406
Average RT
28.4598
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
83
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
83 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 3 | Chr03:2423540–2428634 (-) | 2.068e-13 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 1.095e-12 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 2 | Chr03:5113019–5121557 (+) | 1.537e-11 | |
| Glyma.06G205100 | hypothetical protein | NA | 2 | Chr06:19392099–19394901 (+) | 1.519e-11 | |
| Glyma.06G206000 | hypothetical protein | AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein | 2 | Chr06:19693187–19711341 (-) | 9.532e-12 | |
| Glyma.06G209300 | hypothetical protein | NA | 2 | Chr06:20573671–20581076 (-) | 5.687e-14 | |
| Glyma.08G117500 | hypothetical protein | AT4G18780:IRX1:cellulose synthase family protein | 2 | Chr08:9065033–9071774 (-) | 1.56e-11 | |
| Glyma.11G058500 | hypothetical protein | AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein | 2 | Chr11:4417029–4423791 (-) | 1.89e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 1.581e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 6.825e-12 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 6.408e-12 | |
| Glyma.03G019600 | hypothetical protein | AT2G45640:SAP18:SIN3 associated polypeptide P18 | 1 | Chr03:2007617–2009871 (+) | 5.667e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 1.979e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 2.372e-13 | |
| Glyma.03G035400 | hypothetical protein | AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:4282985–4285957 (-) | 7.436e-11 | |
| Glyma.03G035500 | hypothetical protein | NA | 1 | Chr03:4289118–4294184 (+) | 5.595e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 1.295e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 3.384e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 5.279e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 6.578e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.407e-13 | |
| Glyma.06G204200 | hypothetical protein | AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) | 1 | Chr06:19170925–19173352 (+) | 2.096e-12 | |
| Glyma.06G204600 | hypothetical protein | NA | 1 | Chr06:19307068–19316071 (-) | 6.595e-11 | |
| Glyma.06G204800 | hypothetical protein | AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein | 1 | Chr06:19324767–19334540 (-) | 5.778e-11 | |
| Glyma.06G204900 | hypothetical protein | AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein | 1 | Chr06:19353866–19354929 (+) | 5.778e-11 | |
| Glyma.06G205000 | hypothetical protein | AT5G60940:AT5G60940:Transducin/WD40 repeat-like superfamily protein | 1 | Chr06:19370642–19375687 (-) | 1.519e-11 | |
| Glyma.06G205800 | AP1A | agamous-like MADS-box | AT5G60910:AGL8:AGAMOUS-like 8 | 1 | Chr06:19583729–19590906 (+) | 9.533e-12 |
| Glyma.06G207900 | hypothetical protein | NA | 1 | Chr06:20278974–20282107 (-) | 6.02e-13 | |
| Glyma.06G208000 | hypothetical protein | AT1G74000:SS3:strictosidine synthase 3 | 1 | Chr06:20286288–20288769 (+) | 6.02e-13 | |
| Glyma.06G208900 | hypothetical protein | NA | 1 | Chr06:20515068–20521900 (-) | 6.02e-13 | |
| Glyma.06G209400 | hypothetical protein | NA | 1 | Chr06:20622369–20629712 (+) | 6.02e-13 | |
| Glyma.06G209600 | hypothetical protein | AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:20638577–20641470 (+) | 6.018e-13 | |
| Glyma.06G210000 | hypothetical protein | NA | 1 | Chr06:20706632–20708144 (-) | 6.02e-13 | |
| Glyma.06G210100 | hypothetical protein | NA | 1 | Chr06:20725481–20728890 (-) | 6.02e-13 | |
| Glyma.06G210400 | hypothetical protein | AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit | 1 | Chr06:20768340–20778709 (-) | 6.02e-13 | |
| Glyma.06G210900 | hypothetical protein | AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein | 1 | Chr06:20942818–20945744 (+) | 6.02e-13 | |
| Glyma.06G211500 | hypothetical protein | AT5G19950:AT5G19950:tudor domain protein (DUF1767) | 1 | Chr06:21104409–21114116 (-) | 6.018e-13 | |
| Glyma.06G211700 | hypothetical protein | NA | 1 | Chr06:21226061–21226529 (-) | 1.432e-12 | |
| Glyma.06G211800 | hypothetical protein | NA | 1 | Chr06:21237649–21239875 (+) | 1.432e-12 | |
| Glyma.06G213600 | hypothetical protein | NA | 1 | Chr06:21713618–21726865 (+) | 1.432e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 8.42e-11 | |
| Glyma.08G118400 | hypothetical protein | AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr08:9147404–9153858 (-) | 1.56e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 4.931e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 7.496e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 6.002e-11 | |
| Glyma.10G221500 | hypothetical protein | AT1G22770:GI:gigantea protein (GI) | 1 | Chr10:45294735–45316121 (+) | 1.715e-11 | |
| Glyma.10G263800 | hypothetical protein | AT1G23010:LPR1:Cupredoxin superfamily protein | 1 | Chr10:48805999–48811533 (-) | 7.048e-11 | |
| Glyma.11G060700 | hypothetical protein | NA | 1 | Chr11:4569714–4571506 (+) | 4.549e-11 | |
| Glyma.11G061000 | hypothetical protein | AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr11:4576441–4579697 (+) | 1.828e-12 | |
| Glyma.12G001400 | hypothetical protein | AT1G72090:AT1G72090:Methylthiotransferase | 1 | Chr12:113763–118480 (+) | 5.04e-12 | |
| Glyma.12G001600 | PM27 | seed maturation protein PM27 | AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… | 1 | Chr12:127545–128932 (+) | 5.04e-12 |
| Glyma.12G001700 | hypothetical protein | AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein | 1 | Chr12:132389–134935 (+) | 5.04e-12 | |
| Glyma.12G002400 | hypothetical protein | AT5G47850:CCR4:CRINKLY4 related 4 | 1 | Chr12:197288–200229 (+) | 2.977e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.581e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 2.446e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 6.534e-11 | |
| Glyma.15G110200 | hypothetical protein | NA | 1 | Chr15:8634006–8639001 (-) | 8.377e-11 | |
| Glyma.15G111000 | hypothetical protein | AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… | 1 | Chr15:8692505–8697919 (-) | 1.108e-11 | |
| Glyma.15G136300 | hypothetical protein | AT3G06480:AT3G06480:DEAD box RNA helicase family protein | 1 | Chr15:11013168–11021140 (+) | 2.45e-11 | |
| Glyma.15G136600 | hypothetical protein | AT3G17300:EMB2786:COMPLEX 1 LYR-like protein | 1 | Chr15:11049771–11051844 (-) | 7.955e-12 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 3.604e-12 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 4.507e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 1.433e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 9.495e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 2.092e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 1.002e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 1.681e-11 | |
| Glyma.16G175200 | IF7GT3 | isoflavone 7-O-glucosyltransferase UGT3 | NA | 1 | Chr16:33654666–33656275 (-) | 7.749e-11 |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 9.824e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 7.31e-11 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 7.31e-11 | |
| Glyma.18G055400 | hypothetical protein | NA | 1 | Chr18:4824726–4828902 (+) | 3.448e-13 | |
| Glyma.18G055800 | hypothetical protein | NA | 1 | Chr18:4865252–4867137 (-) | 1.219e-11 | |
| Glyma.18G056300 | hypothetical protein | AT1G16870:AT1G16870:mitochondrial 28S ribosomal protein S29-like protein | 1 | Chr18:4923367–4930055 (-) | 6.482e-11 | |
| Glyma.18G057500 | hypothetical protein | AT2G30170:PBCP:Protein phosphatase 2C family protein | 1 | Chr18:5080060–5083756 (-) | 1.381e-11 | |
| Glyma.18G057600 | hypothetical protein | AT1G07020:AT1G07020:uncharacterized protein | 1 | Chr18:5084210–5084791 (+) | 1.381e-11 | |
| Glyma.18G057900 | hypothetical protein | NA | 1 | Chr18:5092695–5097651 (-) | 1.381e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 8.005e-11 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 4.789e-12 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 8.873e-14 | |
| Glyma.18G300500 | hypothetical protein | NA | 1 | Chr18:57841316–57843280 (+) | 8.921e-12 | |
| Glyma.19G127500 | hypothetical protein | NA | 1 | Chr19:38615244–38616720 (-) | 6.218e-11 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 7.006e-13 |