SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 239 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39453 Hordatine A 566.3005 13.145e-11
P39470 (+)-Cheimonophyllal 282.1434 17.727e-11
P39501 Epigallocatechin 3-O-(3,5-di-O-methylgallate) 486.1154 12.807e-13
P39524 No candidate annotation 637.2939 16.811e-12
P39528 No candidate annotation 498.7220 16.376e-12
P39557 AICAR 338.0623 17.298e-13
P39581 (2S)-2-Cyclopentyl-2-[4-[(2,4-dimethylpyrido[2,3-b]indol-9-yl)methyl]phenyl]-N-[(1S)-2-hydroxy-1-phenylethyl]acetamide 531.2918 14.867e-11
P39609 PI(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/6 keto-PGF1alpha) 996.5363 14.607e-11
P39613 Carboxymethyl chitosan 543.2297 15.909e-11
P39615 Hoodigoside B 894.4947 11.567e-11