P39453
Metabolite ID
P39453
Deionized mass
566.3005 Da
Average m/z
567.3104
Average RT
19.5570
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
38
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
38 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.647e-13 | |
| Glyma.06G183500 | hypothetical protein | AT5G50000:AT5G50000:Protein kinase superfamily protein | 2 | Chr06:15828917–15834067 (+) | 6.206e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 1.54e-13 | |
| Glyma.16G203300 | hypothetical protein | AT5G62230:ERL1:ERECTA-like 1 | 2 | Chr16:36437330–36445131 (+) | 4.452e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.647e-13 | |
| Glyma.20G120200 | hypothetical protein | NA | 2 | Chr20:36268998–36282456 (-) | 3.047e-12 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 6.721e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.38e-12 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 4.308e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 5.13e-11 | |
| Glyma.05G149900 | hypothetical protein | NA | 1 | Chr05:34389242–34393621 (-) | 2.417e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.714e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.881e-16 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.414e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 5.77e-13 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 3.132e-11 | |
| Glyma.09G053800 | hypothetical protein | NA | 1 | Chr09:4737413–4755632 (-) | 9.705e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 5.243e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 4.249e-16 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 7.408e-19 | |
| Glyma.09G110000 | hypothetical protein | NA | 1 | Chr09:21593730–21602127 (+) | 3.119e-11 | |
| Glyma.10G028500 | hypothetical protein | NA | 1 | Chr10:2476846–2478953 (+) | 9.364e-12 | |
| Glyma.10G028700 | hypothetical protein | AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain | 1 | Chr10:2485817–2497071 (-) | 9.363e-12 | |
| Glyma.11G090300 | hypothetical protein | AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein | 1 | Chr11:6849007–6855564 (+) | 6.811e-11 | |
| Glyma.13G062700 | hypothetical protein | AT3G01180:SS2:starch synthase 2 | 1 | Chr13:16045152–16059846 (-) | 1.96e-11 | |
| Glyma.13G062800 | hypothetical protein | AT5G48600:SMC3:structural maintenance of chromosome 3 | 1 | Chr13:16067222–16078901 (-) | 1.96e-11 | |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 5.523e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 3.927e-11 | |
| Glyma.14G063600 | hypothetical protein | AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) | 1 | Chr14:5163603–5167769 (+) | 6.186e-14 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 1.428e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.508e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.145e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 1.862e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 9.161e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 6.541e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 1.812e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 7.96e-11 | |
| Glyma.18G268900 | hypothetical protein | AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 | 1 | Chr18:55259873–55265930 (-) | 7.541e-11 |