Overview Annotation GWAS Evidence Associated genes

P39581

Metabolite ID
P39581
Deionized mass
531.2918 Da
Average m/z
532.3026
Average RT
19.6290
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)9.021e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)8.504e-14
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)8.214e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.351e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.728e-11
Glyma.02G105600 hypothetical protein NA 1Chr02:10041955–10046675 (+)6.229e-11
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)7.352e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.779e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.376e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.272e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.351e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)7.729e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)9.021e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)9.021e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)9.021e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)9.021e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.867e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.65e-11