SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 136 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19348 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 17.075e-13
P19356 Terazosin 387.1942 19.149e-14
P19366 1,4,5-Trimethyl-naphtalene 170.1095 18.921e-11
P19474 Tamoxifen-N-glucuronide 547.2576 16.061e-11
P19477 4-Hydroxy-2-oxohexanoic acid 146.0561 11.09e-13
P19492 2-Deoxystreptidine 246.1435 12.486e-11
P19497 Bursopoietin 339.1996 17.274e-11
P19549 Difloxacin 399.1411 18.656e-13
P19573 2-(4-Methoxyphenyl)-2,2-dimethylethyl glucosinolate 481.1106 11.685e-11
P19611 (2-(4-((2-Chloro-4,4-difluoro-spiro(5H-thieno(2,3-C)pyran-7,4'-piperidine)-1'-yl)methyl)-3-methyl-pyrazol-1-yl)-3-pyridyl)methanol 480.1134 16.117e-13