Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19366

Metabolite ID
P19366
Deionized mass
170.1095 Da
Average m/z
171.1154
Average RT
13.0256
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)5.515e-13
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)3.503e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)1.24e-12
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.339e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)1.632e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.632e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.001e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.554e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.096e-13
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.915e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.82e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.82e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.882e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)8.685e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.602e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)7.324e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.891e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.883e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.106e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.407e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.407e-13
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.821e-14
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.293e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.821e-14
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.821e-14
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.293e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.799e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.722e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.6e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.815e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)2.378e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.378e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)4.425e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.652e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.632e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.339e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.632e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5.417e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.274e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.225e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.225e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.225e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.225e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.775e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.001e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.001e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.001e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.636e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.636e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.699e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.38e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.674e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.674e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.001e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.306e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.306e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.306e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.096e-13
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)8.961e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.217e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.369e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)3.43e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.915e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.921e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.541e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.769e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.554e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.123e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.123e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.609e-11