Overview Annotation GWAS Evidence Associated genes

P19611

Metabolite ID
P19611
Deionized mass
480.1134 Da
Average m/z
481.1189
Average RT
13.0870
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)2.772e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.979e-12
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)1.772e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)3.389e-11
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)3.093e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.481e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.34e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.571e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.248e-15
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)5.187e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.841e-14
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.659e-12
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)7.544e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)5.989e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.399e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.399e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.399e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.399e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.865e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.931e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.22e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.22e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.606e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.136e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)3.357e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.693e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.14e-16
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.117e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.767e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.679e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.994e-13
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)1.63e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.204e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.833e-12