SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G111100

Description hypothetical protein

Gene interval Chr16:24438458–24444801 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1160Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records105

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0905.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1160 matching features · page 1 of 116

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00197 No candidate annotation 173.0305 27.71e-15
P00815 N-Vinylpyrrolidine 97.0882 24.547e-15
P00856 No candidate annotation 514.0622 25.593e-14
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 28.46e-11
P02752 Polanrazine B 377.1240 28.589e-16
P02903 4-(4-(4-Fluorophenyl)-1-(piperidin-4-yl)-1H-imidazol-5-yl)-2-methoxypyrimidine 353.1640 21.065e-13
P04032 Methyl 6-methyl-3-(2-methylpropyl)-4-(3-nitrophenyl)-4,7-dihydrothieno[2,3-b]pyridine-5-carboxylate 386.1272 21.29e-22
P04391 Coptisine 319.0855 28.326e-17
P04966 Dihydroxytryptamine 192.0882 21.507e-17
P06122 No candidate annotation 769.2075 21.958e-15