SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.14G204400

Description hypothetical protein

Gene interval Chr14:46936057–46943868 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features378Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

378 matching features · page 13 of 38

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20196 Quinomycin B0 1112.3986 17.814e-11
P20273 Gliquidone 527.2084 19.282e-13
P20545 Polanrazine D 347.1319 11.209e-14
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 14.175e-11
P20625 Lamiuside D 816.2663 14.081e-11
P20663 Isosophoranone 438.2010 12.403e-11
P20669 [3aS-(3aR*,4R*,5R*,6E,10R*,11aS*)]- 5-(Acetyloxy)-2,3,3a,4,5,8,9,10,11,11a-decahydro-10-(hydroxymethyl)-3-methylene-4-(2-methyl-1-oxopropoxy)-2-oxocyclodeca[b]furan-6-carboxylic acid methyl ester 438.1947 13.268e-12
P21237 No candidate annotation 820.2120 15.058e-11
P21384 10-ethoxy-2methylene-10-oxodecanoic acid 242.1501 11.249e-11
P21471 Illifunone C 252.1331 17.299e-14