Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21237

Metabolite ID
P21237
Deionized mass
820.2120 Da
Average m/z
821.2184
Average RT
13.5161
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.44e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)6.898e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)6.898e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)6.898e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.433e-11
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)2.133e-11
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.834e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.502e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.502e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.29e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.067e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.197e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.735e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.015e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.895e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.377e-14
Glyma.07G067600 hypothetical protein NA 1Chr07:6091311–6093654 (-)6.178e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)4.374e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.656e-12
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 1Chr08:17046316–17048640 (-)3.226e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.524e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.057e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)6.898e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)6.898e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)6.898e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.045e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)6.898e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)6.898e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.137e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.991e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.991e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.99e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.99e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.179e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.54e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.341e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.341e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.341e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.341e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)5.058e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.62e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.075e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.995e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.075e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.075e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.637e-14
Glyma.15G125800 copz2 AT1G60970:AT1G60970:SNARE-like superfamily protein 1Chr15:9966956–9969650 (+)7.83e-12
Glyma.15G125900 hypothetical protein AT1G29820:AT1G29820:Magnesium transporter CorA-like family protein__AT1G29830:AT1G29830:Magnesium transporter CorA-like… 1Chr15:9970216–9977246 (-)7.83e-12
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)6.978e-14
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)7.202e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.749e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.198e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.453e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)3.422e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.313e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)8.735e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.012e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)8.398e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)2.514e-11