Overview Annotation GWAS Evidence Associated genes

P20625

Metabolite ID
P20625
Deionized mass
816.2663 Da
Average m/z
817.2710
Average RT
13.3514
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
151
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

151 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)2.007e-19
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)4.121e-12
Glyma.06G201700 hypothetical protein NA 2Chr06:18577883–18617874 (+)6.729e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.954e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.925e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.032e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.032e-14
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)6.523e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.045e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)2.503e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)3.065e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.566e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.006e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)4.88e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)4.88e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)4.88e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)4.88e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)4.88e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)4.88e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)4.88e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.891e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.891e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)1.48e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)3.452e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.075e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.426e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)9.625e-11
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)7.147e-12
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)7.63e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)5.374e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.462e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.157e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)9.033e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)6.325e-14
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.086e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.188e-14
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)2.435e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)2.435e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.517e-15
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)5.637e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.94e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.321e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.803e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.803e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.792e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.713e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.713e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.713e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)2.434e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.093e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.646e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.233e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.899e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)6.288e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.486e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.486e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.486e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.648e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.349e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.349e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.349e-13
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.062e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.062e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.43e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.43e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)7.507e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)8.6e-11
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)6.914e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.741e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.742e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.359e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.194e-12
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)7.209e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)7.209e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)1.469e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)8.641e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)9.073e-14
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.568e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)8.872e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.367e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.119e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.071e-15
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)4.997e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)5.942e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)6.874e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.251e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.251e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)2.494e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.251e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.251e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)3.114e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)3.114e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)3.114e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.277e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)2.487e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)7.178e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)7.178e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)7.178e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.702e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.702e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)7.178e-11
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)7.067e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.463e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.463e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.23e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.23e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.032e-14
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.199e-13
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.105e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.907e-15
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.519e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.45e-12
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)4.081e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)8.727e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)8.727e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.007e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.319e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.007e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.007e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.211e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.309e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)5.715e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)9.008e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)8.364e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)4.972e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.557e-14
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.032e-16
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.032e-16
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)1.836e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)7.674e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)5.613e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.045e-11
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.384e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.384e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)2.503e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.848e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)2.503e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.399e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.08e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)6.877e-15
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 1Chr18:53885762–53894767 (+)9.024e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)9.463e-14
Glyma.18G265900 hypothetical protein NA 1Chr18:55040041–55042737 (-)2.755e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.225e-13
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.715e-11
Glyma.18G299500 hypothetical protein AT2G43160:AT2G43160:ENTH/VHS family protein 1Chr18:57741567–57749794 (+)3.3e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)6.131e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.312e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.312e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.576e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.049e-11