Overview Annotation GWAS Evidence Associated genes

P20663

Metabolite ID
P20663
Deionized mass
438.2010 Da
Average m/z
439.2084
Average RT
13.3609
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
84
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

84 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.483e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 2Chr03:44064511–44073939 (+)1.587e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.817e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.549e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.622e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)8.53e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.483e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)3.859e-11
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)6.624e-11
Glyma.02G294200 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 1Chr02:47256480–47263517 (+)1.003e-11
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)2.606e-11
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)1.729e-12
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)1.729e-12
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.354e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.354e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)4.096e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.644e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.644e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.644e-11
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)4.243e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)1.721e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.761e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)8.806e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.041e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.066e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.294e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)6.424e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)6.424e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)1.306e-11
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)9.142e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.285e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.742e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.742e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.616e-14
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.929e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.499e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)3.231e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.172e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.171e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.052e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.541e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.541e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.541e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.541e-12
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)3.234e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.758e-13
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)3.234e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.238e-14
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)9.373e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.556e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.453e-17
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.626e-16
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.626e-16
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.626e-16
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.626e-16
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.192e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.957e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.957e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.956e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)7.948e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.379e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.488e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)9.246e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.622e-13
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)6.867e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.867e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.876e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)2.403e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.613e-13
Glyma.15G153400 hypothetical protein NA 1Chr15:12730592–12733439 (+)5.446e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.582e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)8.574e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.149e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.931e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.931e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.92e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.997e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.997e-14
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.351e-11
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)4.124e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.221e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.754e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.812e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)9.336e-11