SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G318900

Description hypothetical protein

Gene interval Chr13:41337944–41344534 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G27810:NAT12:nucleobase-ascorbate transporter 12

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features24Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

24 matching features · page 1 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00638 D-Apiose 150.0524 13.714e-11
P04949 6'-Apiosyllotaustralin 393.1632 16.308e-13
P06981 No candidate annotation 135.0636 16.214e-12
P21190 No candidate annotation 789.2148 13.125e-12
P21326 4-methyl-3-pentenoic acid 114.0670 13.588e-11
P22010 Luteolin 3'-methyl ether 4'-glucoside 462.1231 16.2e-12
P22253 No candidate annotation 360.2841 13.651e-11
P25295 Okaramine A 520.2457 15.474e-11
P25345 Fura-2 641.1548 17.331e-11
P26270 Ophionin 948.2919 17.707e-11