Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21190

Metabolite ID
P21190
Deionized mass
789.2148 Da
Average m/z
790.2254
Average RT
13.5062
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.277e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 2Chr03:4472672–4477787 (-)1.185e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)5.194e-16
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.13e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.801e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.393e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)6.417e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.277e-11
Glyma.01G001300 hypothetical protein AT2G07050:CAS1:cycloartenol synthase 1 1Chr01:227021–237987 (-)1.035e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.105e-14
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 1Chr03:3048805–3061575 (-)8.929e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)6.386e-12
Glyma.03G033600 hypothetical protein AT3G60580:AT3G60580:C2H2-like zinc finger protein 1Chr03:3885839–3887777 (-)4.422e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)2.238e-12
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)3.154e-12
Glyma.03G036200 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 1Chr03:4360966–4367363 (-)4.152e-11
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)6.353e-14
Glyma.03G037300 hypothetical protein NA 1Chr03:4566741–4573890 (+)3.536e-13
Glyma.03G152800 hypothetical protein AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr03:36782245–36790298 (+)8.222e-11
Glyma.03G153200 hypothetical protein NA 1Chr03:36815745–36819041 (-)8.222e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.354e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.349e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.795e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.167e-13
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)1.374e-11
Glyma.07G209600 hypothetical protein NA 1Chr07:38037644–38043272 (+)6.426e-12
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)1.185e-11
Glyma.08G109700 GmJ1 AT4G13830:J20:DNAJ-like 20 1Chr08:8419650–8422508 (+)7.723e-11
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)5.725e-12
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)4.754e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)9.094e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.87e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.94e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.039e-12
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.038e-15
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)6.492e-12
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 1Chr12:8452063–8456493 (+)4.343e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.285e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.285e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.31e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.13e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.483e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.483e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.483e-11
Glyma.13G318900 hypothetical protein AT2G27810:NAT12:nucleobase-ascorbate transporter 12 1Chr13:41337944–41344534 (+)3.125e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.393e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.524e-11
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)9.233e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.857e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.98e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.98e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)5.017e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.645e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.535e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)6.417e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.43e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.43e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.45e-11