Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22010

Metabolite ID
P22010
Deionized mass
462.1231 Da
Average m/z
463.1285
Average RT
13.7494
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.993e-13
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)2.762e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.347e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.696e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.696e-12
Glyma.03G037300 hypothetical protein NA 1Chr03:4566741–4573890 (+)6.794e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.268e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.485e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.069e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.969e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.09e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.644e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.839e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.791e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)6.436e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.373e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.373e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.373e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)6.9e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)6.9e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)6.51e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.699e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.699e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.627e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.042e-14
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.185e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)3.178e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.859e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.696e-14
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.399e-12
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)1.71e-11
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)1.789e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.126e-12
Glyma.09G039000 hypothetical protein NA 1Chr09:3270971–3276530 (-)5.685e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.417e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.167e-11
Glyma.12G007700 hypothetical protein NA 1Chr12:563263–567108 (-)1.978e-12
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)7.463e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.094e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.094e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)7.722e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.826e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.826e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.246e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.627e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.347e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.718e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.718e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.696e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.375e-11
Glyma.13G318900 hypothetical protein AT2G27810:NAT12:nucleobase-ascorbate transporter 12 1Chr13:41337944–41344534 (+)6.2e-12
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)9.167e-11
Glyma.13G319700 hypothetical protein NA 1Chr13:41414504–41418957 (+)9.272e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)5.579e-11
Glyma.14G084200 hypothetical protein NA 1Chr14:7375402–7379417 (-)1.234e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.168e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)1.141e-11
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)1.176e-11
Glyma.15G111900 hypothetical protein NA 1Chr15:8769366–8777275 (-)3.33e-11
Glyma.15G112100 hypothetical protein AT4G04180:AT4G04180:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr15:8796403–8805644 (-)3.33e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.48e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)3.646e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)3.646e-12
Glyma.16G003300 hypothetical protein AT5G49960:AT5G49960:ion channel protein 1Chr16:183599–192001 (+)8.447e-11
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 1Chr16:194687–196274 (-)6.46e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)2.191e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.968e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)5.321e-13
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.248e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.043e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.043e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)2.452e-13
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)2.762e-14
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)6.565e-12
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)8.527e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.383e-14
Glyma.18G268000 hypothetical protein NA 1Chr18:55205656–55213313 (-)1.653e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.939e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.939e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)5.329e-12
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)6.827e-11