SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G204000

Description hypothetical protein

Gene interval Chr12:36428558–36432835 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G03687:AT1G03687:DTW domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3412Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3412 matching features · page 28 of 342

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04949 6'-Apiosyllotaustralin 393.1632 11.708e-13
P04966 Dihydroxytryptamine 192.0882 12.807e-17
P04974 Caulerpin 398.1290 14.795e-11
P04997 Imazapyr 261.1122 15.127e-12
P04999 cis-1,2-Dihydroxy-1,2-dihydrodibenzothiophene 218.0426 12.59e-14
P05023 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0420 11.045e-11
P05051 Lenalidomide 259.0953 17.468e-11
P05065 N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine 819.8070 12.68e-12
P05070 Flunoxaprofen 285.0822 11.476e-12
P05074 Lithospermoside 329.1087 11.958e-11