Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05074

Metabolite ID
P05074
Deionized mass
329.1087 Da
Average m/z
330.1150
Average RT
8.5827
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.154e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.548e-14
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)1.624e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)2.392e-12
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)9.853e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.514e-13
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)2.786e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.091e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.74e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)5.878e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.944e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.086e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.548e-14
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.548e-14
Glyma.06G320800 IF7GT6 isoflavone 7-O-glucosyltransferase UGT6 NA 1Chr06:50951025–50956134 (-)3.885e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.717e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.768e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.716e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.595e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.139e-14
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)6.046e-11
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)2.541e-11
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)2.541e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.958e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.958e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.063e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)9.311e-15
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)9.311e-15
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)9.311e-15
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.267e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.989e-15
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.401e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.647e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.625e-11
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)4.532e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)9.349e-11
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)9.853e-13
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)6.334e-11
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 1Chr18:13141007–13143331 (-)8.031e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)9.041e-14
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)5.371e-11
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 1Chr20:45278452–45280126 (-)5.529e-11