SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G114900

Description hypothetical protein

Gene interval Chr12:11457987–11462951 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2671Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2671 matching features · page 265 of 268

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54286 GDC-0834 Racemate 596.2592 11.756e-11
P54340 O-Methylsomniferine 622.2666 17.438e-11
P54353 No candidate annotation 487.3994 13.529e-11
P54402 Catuabine E 371.1815 19.923e-12
P54424 No candidate annotation 627.2805 13.699e-12
P54442 [(2S,3R)-2-Amino-3-hydroxybutanoyl] (2S)-pyrrolidine-2-carboxylate 216.1124 18.215e-11
P54509 n2-Acetyl,n6-methyllysine 202.1324 14.962e-12
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 12.701e-12
P54549 Akuammine 382.1900 14.169e-12
P54556 No candidate annotation 276.9028 19.982e-11