P54424
Metabolite ID
P54424
Deionized mass
627.2805 Da
Average m/z
628.2867
Average RT
31.0212
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G196900 | hypothetical protein | NA | 4 | Chr16:35841279–35846894 (-) | 9.99e-13 | |
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 7.995e-14 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3 | Chr16:26324650–26336836 (+) | 5.051e-12 | |
| Glyma.16G118400 | hypothetical protein | AT2G17190:AT2G17190:ubiquitin family protein | 3 | Chr16:26356863–26371741 (-) | 5.038e-11 | |
| Glyma.16G210200 | hypothetical protein | NA | 3 | Chr16:36933402–36938940 (+) | 9.376e-13 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 3 | Chr16:36943073–36948828 (+) | 2.618e-14 | |
| Glyma.08G122200 | hypothetical protein | NA | 2 | Chr08:9416766–9429995 (-) | 2.904e-12 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 2.904e-12 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2 | Chr12:36289704–36295084 (-) | 6.167e-13 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 1.66e-11 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 7.093e-11 | |
| Glyma.01G032400 | hypothetical protein | NA | 1 | Chr01:3404831–3411453 (+) | 2.432e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 9.447e-14 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 9.447e-14 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 7.295e-13 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 7.067e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 7.92e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.092e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 6.484e-11 | |
| Glyma.04G190700 | hypothetical protein | NA | 1 | Chr04:46143583–46146881 (+) | 1.9e-12 | |
| Glyma.04G190800 | hypothetical protein | AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 | 1 | Chr04:46143080–46147709 (-) | 1.9e-12 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 2.65e-11 | |
| Glyma.05G149300 | hypothetical protein | AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein | 1 | Chr05:34357418–34361032 (-) | 1.21e-11 | |
| Glyma.05G149900 | hypothetical protein | NA | 1 | Chr05:34389242–34393621 (-) | 1.21e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 6.985e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.664e-16 | |
| Glyma.06G168700 | hypothetical protein | AT5G63520:AT5G63520:F-box/LRR protein | 1 | Chr06:14104416–14111842 (+) | 6.186e-11 | |
| Glyma.07G070300 | hypothetical protein | AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein | 1 | Chr07:6364435–6372387 (-) | 4.435e-11 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 2.904e-12 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 2.904e-12 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 1.968e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 2.904e-12 | |
| Glyma.09G252100 | hypothetical protein | AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | 1 | Chr09:47245185–47248478 (+) | 5.609e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 7.806e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 7.806e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 3.699e-12 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 3.699e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 1.512e-14 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 1.512e-14 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.345e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 1 | Chr12:36406747–36413696 (+) | 4.199e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 6.565e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 6.565e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 6.565e-11 | |
| Glyma.13G200600 | hypothetical protein | AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein | 1 | Chr13:31428112–31429431 (-) | 6.817e-11 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 1 | Chr14:6037810–6041899 (+) | 3.185e-11 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 3.185e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 5.237e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 1.237e-11 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 5.038e-11 | |
| Glyma.16G118600 | hypothetical protein | NA | 1 | Chr16:26442194–26445922 (+) | 5.038e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 5.692e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 2.956e-12 | |
| Glyma.16G173000 | hypothetical protein | NA | 1 | Chr16:33365497–33367017 (+) | 3.079e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 4.519e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 5.769e-11 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 9.377e-13 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 2.618e-14 | |
| Glyma.17G212300 | hypothetical protein | AT5G25310:AT5G25310:Exostosin family protein | 1 | Chr17:35122156–35129564 (-) | 4.888e-11 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 1.66e-11 | |
| Glyma.18G201700 | hypothetical protein | NA | 1 | Chr18:48175554–48180264 (+) | 2.378e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 5.214e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 1.019e-12 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 1.371e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 4.877e-15 |