SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 60 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29868 No candidate annotation 1094.5497 12.355e-13
P29891 Ustilipid C 634.3999 15.795e-12
P29898 SCH 42282 780.4610 11.091e-13
P29909 No candidate annotation 1094.0606 13.198e-13
P29919 1,10-Epoxy-aristolane 220.1810 14.53e-11
P29923 CDP-DG(a-21:0/5-iso PGF2VI) 1093.5546 16.609e-12
P29991 Multifidol 210.0893 12.682e-12
P29992 N-Sulfonyloxy-PhIP 320.0566 11.333e-12
P30039 Tigloylseneganolide A 550.2618 11.556e-11
P30073 gamma-L-Glutamyl-S-(hercyn-2-yl)-L-cysteine S-oxide 461.1614 19.262e-11