SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 36 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18089 Hypecoleptopine 445.1298 12.959e-12
P18098 Ketotifen 309.1180 12.404e-12
P18196 No candidate annotation 105.0291 14.676e-12
P18268 O-Methylsakerinol A 451.2040 16.105e-11
P18375 Tunichrome Sp-1 663.2553 12.681e-15
P18446 No candidate annotation 1080.3689 14.348e-11
P18514 Cyclosulfamuron 421.1098 11.01e-11
P18570 7-O-Galloyl-sedoheptulose 362.0859 14.104e-12
P18589 Myxochelin C 539.1819 15.813e-11
P18591 No candidate annotation 704.3079 12.657e-14