Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18098

Metabolite ID
P18098
Deionized mass
309.1180 Da
Average m/z
310.1252
Average RT
12.6976
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)4.69e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.031e-12
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 2Chr17:31731965–31738073 (+)1.047e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.019e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.031e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.704e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)4.95e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)7.227e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)4.352e-11
Glyma.03G039900 hypothetical protein NA 1Chr03:4988423–4991582 (-)6.448e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.236e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)6.723e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.585e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.364e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.154e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.241e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.313e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.27e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.27e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.223e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.952e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)5.51e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.207e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)6.358e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)4.634e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)3.243e-13
Glyma.07G096900 GmChl 2 AT1G19670:CLH1:chlorophyllase 1 1Chr07:9083837–9085839 (-)1.869e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.687e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.289e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)6.373e-11
Glyma.10G261100 hypothetical protein NA 1Chr10:48628245–48635184 (+)7.945e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)1.41e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.404e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.067e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.067e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.067e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)1.292e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)7.855e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)5.078e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.374e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.078e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.818e-16
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.414e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.341e-11
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)3.717e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.01e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.235e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.108e-12
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)1.229e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.69e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)4.719e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.196e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.504e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.632e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.55e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.041e-15
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.743e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.102e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.102e-11
Glyma.17G200400 hypothetical protein NA 1Chr17:31864566–31869426 (-)1.047e-12
Glyma.17G201000 hypothetical protein AT3G49600:UBP26:ubiquitin-specific protease 26 1Chr17:31946807–31956876 (-)1.047e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.019e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.917e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.917e-12