Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18089

Metabolite ID
P18089
Deionized mass
445.1298 Da
Average m/z
446.1380
Average RT
12.6968
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.146e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.42e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)3.67e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.14e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.799e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.928e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)3.128e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.146e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.525e-11
Glyma.01G038800 hypothetical protein NA 1Chr01:4162465–4166783 (-)2.785e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.513e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.418e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.644e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)5.322e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.855e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.251e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)7.365e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.673e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.42e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.42e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)9.755e-14
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)6.539e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)4.727e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.527e-12
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)5.247e-12
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)5.247e-12
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)5.247e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)6.634e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)5.034e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)5.034e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)5.034e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)9.222e-12
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)9.222e-12
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)9.222e-12
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)2.878e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.959e-12
Glyma.12G054500 hypothetical protein NA 1Chr12:3938604–3943724 (+)4.987e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)8.721e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.451e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.451e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.893e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.893e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.893e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.893e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.771e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.799e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.391e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.488e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.714e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.111e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.265e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.074e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.67e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.941e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.682e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.682e-14
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)6.832e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)3.282e-11
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)6.02e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)8.96e-12