Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18268

Metabolite ID
P18268
Deionized mass
451.2040 Da
Average m/z
452.2147
Average RT
12.7305
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.56e-13
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)3.13e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 2Chr12:34708678–34710549 (+)5.518e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.083e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.02e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.02e-15
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)1.396e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.56e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.248e-13
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)4.257e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.078e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)7.215e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.801e-13
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)5.684e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.48e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.322e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.464e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.116e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)4.421e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.489e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.152e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.489e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.489e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.152e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.702e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.145e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)5.556e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)5.556e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.238e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)4.275e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.554e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.137e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)6.105e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.601e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.601e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.652e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.652e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)2.472e-14
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 1Chr12:34690356–34692672 (+)3.036e-11
Glyma.12G186300 hypothetical protein NA 1Chr12:34717587–34719271 (+)7.062e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.855e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.67e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.67e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.02e-15
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.02e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.415e-14
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)5.165e-14
Glyma.13G138300 hypothetical protein AT2G37130:AT2G37130:Peroxidase superfamily protein 1Chr13:25095882–25099473 (-)2.056e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.097e-12
Glyma.14G191400 hypothetical protein NA 1Chr14:45610980–45612600 (+)1.898e-13
Glyma.14G192100 hypothetical protein AT5G58870:ftsh9:FTSH protease 9 1Chr14:45680613–45688731 (+)1.3e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.973e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.445e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.973e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.973e-13
Glyma.16G075800 hypothetical protein AT4G19420:AT4G19420:Pectinacetylesterase family protein 1Chr16:7646131–7651379 (+)7.358e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.066e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)5.178e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.249e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)5.105e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.585e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.512e-15
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.917e-12