SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 13 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07200 No candidate annotation 707.1837 18.214e-11
P07213 Boc-L-cysteine 221.0741 18.529e-13
P07278 No candidate annotation 435.1175 18.272e-13
P07347 Coumanolignan 318.1268 14.38e-14
P07366 O-Phospho-L-serine 185.0125 11.2e-15
P07384 Islatravir 293.0919 14.235e-12
P07405 No candidate annotation 470.9858 13.033e-13
P07444 Hept-4-enedioylcarnitine 301.1508 14.084e-12
P07492 Polypropylene glycol (m w 1,200-3,000) 134.0949 14.523e-12
P07500 Diaveridine 260.1291 17.058e-12