Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07213

Metabolite ID
P07213
Deionized mass
221.0741 Da
Average m/z
222.0824
Average RT
9.3291
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
151
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

151 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.609e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.099e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)2.916e-14
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.083e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)5.378e-14
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 2Chr05:37029299–37037313 (+)1.577e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)4.83e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.432e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.05e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.934e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.015e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)6.649e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)8.928e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.823e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.248e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.097e-12
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)9.435e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)2.173e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)2.173e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)2.173e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.859e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.859e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.857e-15
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)2.321e-11
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 1Chr02:29019977–29028838 (-)2.619e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.543e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.231e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.385e-12
Glyma.03G022200 hypothetical protein NA 1Chr03:2326204–2327764 (+)9.623e-12
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)1.488e-11
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)2.412e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)9.105e-12
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)2.792e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)5.732e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.621e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.456e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.509e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.712e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.015e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.067e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.067e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.287e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.305e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.305e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.305e-14
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)7.897e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.211e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)8.714e-12
Glyma.05G182100 hypothetical protein NA 1Chr05:37003489–37004855 (-)2.261e-12
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)1.577e-14
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)1.577e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.073e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.712e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.712e-11
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 1Chr06:47380397–47390651 (+)1.889e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.083e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.083e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.404e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)1.389e-12
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)8.696e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)3.716e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.165e-16
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.002e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.383e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.633e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.923e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)5.98e-11
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)8.445e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.146e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.357e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.438e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.257e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.257e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.257e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.257e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.189e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.628e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.93e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.589e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.589e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.589e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.589e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.689e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.623e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.622e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.623e-13
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)3.64e-14
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)9.481e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.529e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)7.001e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.876e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.876e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.705e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.321e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.299e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.299e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.78e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.876e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.876e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.876e-11
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)9.493e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.743e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.2e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.199e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.2e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.199e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.062e-13
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.125e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.181e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)8.896e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.05e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.934e-13
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.241e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.053e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.838e-17
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.773e-15
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.181e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)4.136e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)4.136e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)2.602e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)9.994e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)9.877e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.975e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)8.147e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)4.45e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.927e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.462e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.798e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.565e-14
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)7.418e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)9.213e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.214e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.649e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.724e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 1Chr18:47102746–47129707 (+)7.637e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)8.137e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)8.996e-13
Glyma.18G252000 hypothetical protein AT1G02100:SBI1:Leucine carboxyl methyltransferase 1Chr18:53874840–53885068 (-)1.39e-11
Glyma.18G252200 hypothetical protein NA 1Chr18:53899264–53899758 (+)2.917e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)2.148e-12
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)3.537e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.248e-13
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)7.951e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.776e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.776e-16
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.397e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.63e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.176e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.825e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)5.164e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)4.622e-11