SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G048600

Description hypothetical protein

Gene interval Chr11:3634128–3639401 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G67470:FH6:formin homolog 6

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features149Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

149 matching features · page 15 of 15

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54259 (5alpha)-27-norcholest-25en-2beta,3alpha,6alpha-triyl tris(hydrogen sulfate) 644.2000 11.451e-11
P54302 N-[(1R)-1-[3-(4-Ethoxyphenyl)-4-oxopyrido[2,3-d]pyrimidin-2-yl]ethyl]-N-(pyridin-3-ylmethyl)-2-[4-(trifluoromethoxy)phenyl]acetamide 603.2210 15.606e-12
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 11.426e-11
P54566 2-Propylphenol 136.0877 15.708e-11
P54843 (9Z,12Z,15Z)-17-Hydroxyoctadeca-9,12,15-trienoylcarnitine 437.3105 11.156e-11
P54974 5-Methyldihydroflavasperone 302.1135 11.073e-13
P55276 No candidate annotation 144.9466 19.182e-11
P55369 Amprenavir 505.2250 11.957e-11
P55376 No candidate annotation 465.3991 16.344e-11