P54974
Metabolite ID
P54974
Deionized mass
302.1135 Da
Average m/z
303.1226
Average RT
31.4991
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
86
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
86 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 3 | Chr03:2423540–2428634 (-) | 4.357e-13 | |
| Glyma.06G201700 | hypothetical protein | NA | 3 | Chr06:18577883–18617874 (+) | 1.234e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 3.995e-14 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 3 | Chr16:35170253–35173950 (-) | 2.083e-17 | |
| Glyma.16G196900 | hypothetical protein | NA | 3 | Chr16:35841279–35846894 (-) | 6.7e-13 | |
| Glyma.01G126800 | hypothetical protein | NA | 2 | Chr01:43602195–43612710 (+) | 5.419e-14 | |
| Glyma.07G107100 | DHBK | putative 3,4-dihydroxy-2-butanone kinase | AT3G17770:AT3G17770:Dihydroxyacetone kinase | 2 | Chr07:10447848–10456329 (+) | 7.802e-11 |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.2e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.2e-14 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 2 | Chr16:35831912–35835153 (+) | 6.022e-12 | |
| Glyma.01G119600 | SLE3 | AT2G40170:GEA6:Stress induced protein | 1 | Chr01:41172520–41174209 (-) | 4.342e-13 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 1.273e-16 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 9.647e-17 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 3.749e-19 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 1.813e-17 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 4.622e-15 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 4.622e-15 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 4.622e-15 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 4.622e-15 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 4.622e-15 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 4.622e-15 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 4.622e-15 | |
| Glyma.01G126900 | hypothetical protein | NA | 1 | Chr01:43632082–43635399 (+) | 5.419e-14 | |
| Glyma.01G127400 | hypothetical protein | AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… | 1 | Chr01:43890586–43892006 (+) | 1.195e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.152e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 8.225e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 4.128e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 5.676e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 5.676e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 3.249e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.336e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.241e-14 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 2.052e-11 | |
| Glyma.06G202000 | hypothetical protein | AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein | 1 | Chr06:18655235–18667810 (-) | 6.982e-11 | |
| Glyma.06G202200 | hypothetical protein | AT1G74310:HSP101:heat shock protein 101 | 1 | Chr06:18712866–18716868 (+) | 2.784e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 3.285e-12 | |
| Glyma.06G313600 | hypothetical protein | AT5G13750:ZIFL1:zinc induced facilitator-like 1 | 1 | Chr06:50219160–50226659 (-) | 2.082e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 4.817e-11 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 1.438e-12 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 1 | Chr07:1697119–1698666 (+) | 1.519e-12 | |
| Glyma.08G148500 | hypothetical protein | AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:11362991–11368184 (-) | 4.557e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 1.128e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 4.721e-16 | |
| Glyma.11G048600 | hypothetical protein | AT5G67470:FH6:formin homolog 6 | 1 | Chr11:3634128–3639401 (-) | 1.073e-13 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.545e-16 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 3.694e-15 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 3.694e-15 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 3.694e-15 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 3.694e-15 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 3.554e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 3.554e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.979e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.979e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 1.529e-12 | |
| Glyma.12G193800 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 1 | Chr12:35551596–35559129 (+) | 1.953e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.367e-14 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.367e-14 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.2e-14 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 6.775e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 2.743e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 4.854e-13 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.081e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 3.439e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.081e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.081e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 6.382e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 6.132e-11 | |
| Glyma.16G003600 | hypothetical protein | AT5G49945:AT5G49945: | 1 | Chr16:198072–202486 (-) | 3.609e-11 | |
| Glyma.16G025300 | hypothetical protein | NA | 1 | Chr16:2438122–2440528 (-) | 4.773e-13 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 1 | Chr16:2443212–2450834 (-) | 4.773e-13 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.896e-11 |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 8.714e-11 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 2.925e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 2.158e-11 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 9.422e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 1.717e-13 | |
| Glyma.16G189200 | hypothetical protein | AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein | 1 | Chr16:35177846–35179798 (+) | 1.031e-11 | |
| Glyma.16G189500 | hypothetical protein | NA | 1 | Chr16:35202920–35206459 (-) | 3.313e-11 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 1.676e-11 |
| Glyma.16G209000 | hypothetical protein | NA | 1 | Chr16:36841786–36845498 (-) | 3.89e-11 | |
| Glyma.17G258700 | hypothetical protein | AT4G24190:SHD:Chaperone protein htpG family protein | 1 | Chr17:41280124–41284980 (-) | 3.89e-12 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 3.962e-12 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 3.766e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 9.852e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 9.853e-12 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 7.224e-11 |