SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G239000

Description hypothetical protein

Gene interval Chr10:46755702–46757579 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features127Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0079.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

127 matching features · page 7 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24957 Sodium humate 482.2104 17.17e-11
P25172 Validamycin G 513.2035 13.619e-11
P25505 Dracotanoside A 833.3882 19.857e-11
P25868 Cratoxyxanthone 834.3125 17.897e-11
P26326 No candidate annotation 277.6307 19.758e-11
P26381 No candidate annotation 1128.5275 12.104e-11
P26447 Epimedokoreanoside II 718.2479 11.682e-11
P27041 No candidate annotation 878.4007 12.809e-11
P27053 (2R)-4-(Dimethylsulfaniumyl)-2-hydroxybutanoate 164.0520 17.494e-11
P27622 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1647 11.365e-11