Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26447

Metabolite ID
P26447
Deionized mass
718.2479 Da
Average m/z
719.2554
Average RT
14.9792
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
93
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

93 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)1.541e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.161e-14
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)2.38e-12
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)2.1e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)9.475e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)1.121e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.375e-23
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.126e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)9.954e-16
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.157e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.153e-11
Glyma.01G181000 hypothetical protein NA 1Chr01:51703710–51704994 (-)5.423e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.638e-15
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)7.469e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.925e-13
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.925e-13
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)5.261e-14
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.065e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.065e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.065e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.906e-13
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)4.774e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)4.774e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)2.337e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)3.406e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.734e-12
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)3.981e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.705e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.94e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.681e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.113e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.091e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.365e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.365e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.644e-14
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.24e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)3.068e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.161e-14
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.161e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)4.791e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)6.457e-12
Glyma.08G207300 hypothetical protein NA 1Chr08:16745344–16755320 (+)6.469e-11
Glyma.08G207400 hypothetical protein AT1G80000:AT1G80000:CASC3/Barentsz eIF4AIII binding protein 1Chr08:16756340–16761352 (+)6.469e-11
Glyma.08G207500 hypothetical protein NA 1Chr08:16760797–16761352 (+)6.469e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.622e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.217e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.214e-12
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)1.682e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)1.682e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)1.682e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)7.391e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.133e-11
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)2.772e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)1.376e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)6.227e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.121e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.284e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.912e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.912e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.912e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.801e-12
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)1.851e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.322e-18
Glyma.13G184000 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 1Chr13:29775320–29779417 (+)9.707e-12
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)6.527e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.633e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.867e-16
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.867e-16
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.571e-17
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.126e-15
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.954e-16
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.927e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.35e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.052e-16
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.464e-13
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)2.959e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.618e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.065e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.065e-14
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.935e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)9.585e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.586e-11
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)5.607e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.166e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.166e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)9.475e-12
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)3.934e-11
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)9.281e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.787e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.837e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.837e-15
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)1.664e-12
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)3.894e-11