SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 97 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25855 Israpafant 488.1811 12.127e-14
P25862 Amocarzine 371.1445 14.263e-11
P25880 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2658 11.115e-16
P25919 Epimedokoreanoside I 922.3216 14.99e-14
P25958 Pestalotheol B 296.1612 15.44e-12
P25974 No candidate annotation 788.2214 17.802e-11
P26010 Aristophyll B 564.2756 13.521e-11
P26089 Kni 102 595.2949 14.333e-12
P26107 Spirotryprostatin D 511.2306 13.214e-12
P26108 No candidate annotation 792.2520 12.083e-14