Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26108

Metabolite ID
P26108
Deionized mass
792.2520 Da
Average m/z
793.2541
Average RT
14.8751
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)3.95e-16
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.71e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)2.042e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.83e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)1.594e-13
Glyma.16G111100 hypothetical protein NA 2Chr16:24438458–24444801 (+)3.95e-16
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 2Chr16:24720965–24731678 (-)1.516e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.347e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.993e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.014e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)1.167e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.802e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.989e-14
Glyma.06G132600 hypothetical protein AT4G27700:AT4G27700:Rhodanese/Cell cycle control phosphatase superfamily protein 1Chr06:10927802–10930491 (+)4.389e-11
Glyma.06G133800 hypothetical protein NA 1Chr06:11001171–11002938 (-)1.406e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.595e-14
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.925e-14
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.595e-14
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.595e-14
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.925e-14
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)1.142e-14
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)6.111e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)6.111e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)9.761e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.734e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.083e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.083e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.083e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.083e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.862e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.833e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)9.389e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)3.206e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)3.206e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)3.206e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.667e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.131e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.551e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.131e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.131e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)2.901e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.174e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.114e-11
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 1Chr16:24455709–24466236 (+)1.516e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.089e-15
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.71e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.71e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.71e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.71e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.342e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)3.813e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.83e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.83e-12