SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 77 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20505 Coutaric acid 349.1975 11.041e-11
P20514 Pentacarboxyl porphyrinogen III 700.2711 11.064e-16
P20549 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1583 12.381e-11
P20559 No candidate annotation 793.4029 14.587e-12
P20561 No candidate annotation 669.1601 18.782e-15
P20575 Seminaphtharhodafluor 381.1035 13.217e-12
P20604 L-Asparagine 132.0552 12.863e-12
P20625 Lamiuside D 816.2663 14.251e-11
P20643 No candidate annotation 728.2711 12.141e-13
P20649 Isochamanetin 362.1091 11.618e-14