SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 72 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18669 2'-O-Apiosylphyllocactin 768.1781 16.327e-13
P18680 Pirenperone 393.1844 15.708e-12
P18778 No candidate annotation 731.1659 14.204e-11
P18787 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1517 14.071e-14
P18857 No candidate annotation 710.2722 18.361e-11
P18917 (6R,8Z)-6-Hydroxy-3-oxotetradecenoic acid 256.1642 12.673e-11
P18934 4-hydroxyoct-6-enoylglycine 215.1122 19.418e-12
P18940 Azadirachtin N 680.2572 18.365e-11
P18970 Deoxypumiloside 496.1831 12.002e-12
P18975 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12R-hydroxy-7E,10E,14Z,17Z-prostatetraenoate-cyclo[8,12R] 496.1893 14.149e-11