Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18680

Metabolite ID
P18680
Deionized mass
393.1844 Da
Average m/z
394.1927
Average RT
12.8248
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.454e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.884e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)6.757e-18
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)5.418e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)6.003e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.573e-13
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)4.735e-11
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)6.466e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)3.298e-12
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)2.056e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.899e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)7.105e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.454e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.454e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.454e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.454e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.243e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)7.306e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.708e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.708e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.708e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.708e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.738e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.637e-14
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)9.437e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)7.451e-16
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.773e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.773e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.226e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.226e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.226e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.1e-12
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.091e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.091e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.82e-17
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)9.808e-11
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)9.808e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.757e-18
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.009e-12
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)7.883e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.164e-15
Glyma.17G064100 hypothetical protein AT5G57490:VDAC4:voltage dependent anion channel 4 1Chr17:4930968–4937489 (-)9.899e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.164e-15
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)6.98e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)4.759e-12