Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18787

Metabolite ID
P18787
Deionized mass
712.1517 Da
Average m/z
713.1565
Average RT
12.8414
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.94e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.808e-11
Glyma.03G143600 hypothetical protein NA 2Chr03:35928279–35931862 (-)2.738e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.307e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.307e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.307e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.395e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.94e-13
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)7.284e-12
Glyma.03G143300 hypothetical protein NA 1Chr03:35907767–35909994 (+)2.738e-11
Glyma.04G022700 hypothetical protein AT1G11320:AT1G11320:GDSL esterase/lipase 1Chr04:1785557–1788191 (-)4.335e-11
Glyma.04G023600 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 1Chr04:1864445–1871054 (+)1.539e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.776e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.728e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.728e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.728e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.769e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.741e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.075e-15
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 1Chr06:47380397–47390651 (+)5.341e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.368e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.368e-11
Glyma.06G296000 hypothetical protein AT1G03620:AT1G03620:ELMO/CED-12 family protein 1Chr06:48475832–48480856 (+)2.677e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.307e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.307e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.307e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.307e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.307e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)5.89e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.071e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.071e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.071e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.071e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.597e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.703e-12
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)1.32e-13
Glyma.14G203800 hypothetical protein NA 1Chr14:46841491–46853116 (-)8.328e-11
Glyma.14G203900 hypothetical protein NA 1Chr14:46856580–46859641 (-)1.739e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.78e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.852e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.808e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.808e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.808e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)6.744e-12
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 1Chr19:45273343–45277374 (-)1.74e-12