Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18857

Metabolite ID
P18857
Deionized mass
710.2722 Da
Average m/z
711.2805
Average RT
12.8630
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
93
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

93 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.711e-11
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.3e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.967e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.967e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.967e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.323e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.52e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.505e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.505e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.284e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.299e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)1.61e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.457e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.457e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.059e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.051e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)9.202e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.181e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.659e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.027e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.154e-14
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)1.712e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.033e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.948e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.862e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.862e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.552e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.385e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.385e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.385e-14
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.092e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.086e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.884e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.769e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.719e-15
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)8.986e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.514e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.514e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.986e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.997e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.998e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)9.554e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)9.554e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.711e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.711e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.486e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.614e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)8.356e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.55e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.412e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.649e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.974e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.967e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.967e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.967e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.967e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.967e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)2.234e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)7.759e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.361e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.361e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.361e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.361e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.085e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.138e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.21e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.21e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.71e-15
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.71e-15
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.647e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.257e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.257e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.039e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.039e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.505e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.967e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.299e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.63e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.627e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.085e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.885e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.092e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.486e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.161e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.026e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.334e-12
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)1.61e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.111e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)1.61e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.118e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.118e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.199e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.015e-11