SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 123 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32635 No candidate annotation 251.0490 18.772e-13
P32642 1-eicosyl-glycero-3-phospho-(1'-myo-inositol) 614.3751 16.632e-12
P32650 Thonzylamine 286.1756 11.719e-11
P32664 1,3-Benzodioxole 122.0372 11.102e-12
P32673 Pyroglu-Glu-Asp-Ser-GlyOH 517.1654 11.817e-13
P32697 Gypenoside XLVIII 1076.5713 14.638e-12
P32790 6,8-nonadienal 138.1041 12.795e-11
P32815 No candidate annotation 826.3427 14.085e-12
P32877 2-(4-(Methylamino)phenyl)benzo[d]thiazol-6-ol 256.0679 16.786e-12
P32890 2-Hydroxy-3-[(2-carboxyethyl)thio]-3-[2-(8-phenyloctyl)phenyl]propanoic acid 458.2131 13.838e-12