Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32664

Metabolite ID
P32664
Deionized mass
122.0372 Da
Average m/z
123.0448
Average RT
16.7513
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 2Chr13:14742455–14747878 (-)4.105e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)3.141e-11
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)3.563e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.988e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.988e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.957e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.026e-17
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.643e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.236e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.236e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.236e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)5.402e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)7.779e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)7.779e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)2.018e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)2.234e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)2.234e-11
Glyma.07G243600 hypothetical protein NA 1Chr07:42336266–42345196 (+)9.635e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.27e-19
Glyma.08G200200 hypothetical protein NA 1Chr08:16187816–16191151 (+)5.746e-12
Glyma.08G200500 hypothetical protein NA 1Chr08:16217120–16222339 (+)9.435e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.505e-13
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)2.228e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)9.85e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)6.895e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)6.895e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.102e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.102e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.102e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.102e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.445e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.097e-13
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.949e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.383e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.39e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.39e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)1.753e-13
Glyma.13G052100 hypothetical protein NA 1Chr13:14902730–14924713 (-)1.706e-11
Glyma.13G052800 hypothetical protein NA 1Chr13:15005141–15009623 (+)4.789e-12
Glyma.13G053300 hypothetical protein NA 1Chr13:15064460–15069264 (-)3.792e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.812e-11
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)7.234e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.025e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.591e-11
Glyma.16G075600 hypothetical protein AT4G19450:AT4G19450:Major facilitator superfamily protein 1Chr16:7617667–7623067 (-)8.701e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.108e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.184e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.184e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)8.063e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)8.064e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)3.141e-11
Glyma.18G003300 hypothetical protein NA 1Chr18:276941–280909 (+)6.632e-11
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)2.858e-11
Glyma.18G260700 hypothetical protein NA 1Chr18:54660451–54661757 (+)2.246e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.257e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.831e-12