Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32697

Metabolite ID
P32697
Deionized mass
1076.5713 Da
Average m/z
1077.5717
Average RT
16.7670
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
95
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

95 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)7.916e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)9.051e-13
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)2.24e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)5.382e-17
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)2.876e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.676e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.347e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.261e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.907e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)7.916e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)9.699e-14
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)7.589e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)9.184e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)9.184e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)9.184e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.47e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.876e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.016e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)6.422e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)4.369e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.388e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.333e-12
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.578e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.497e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.933e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.143e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.809e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.412e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.272e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.272e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.231e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)9.382e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)9.382e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)9.382e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)9.051e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)9.051e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.654e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.669e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)8.799e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)9.328e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)9.187e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.561e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)6.721e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.213e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.99e-19
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.651e-17
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.638e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.638e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.638e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.638e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.116e-12
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)5.178e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.299e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.654e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.654e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.654e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.654e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.618e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.618e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.749e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.749e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)7.593e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.381e-17
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.956e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.136e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)9.532e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.809e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.57e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.808e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.344e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.87e-12
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)3.572e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)3.572e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.571e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.347e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.518e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.518e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.717e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.273e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.005e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.969e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.4e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.4e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.424e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.547e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.683e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.109e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.109e-11
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)2.403e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.97e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.385e-17
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.385e-17
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.417e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.794e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.307e-12