SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G028500

Description hypothetical protein

Gene interval Chr10:2476846–2478953 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features477Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

477 matching features · page 46 of 48

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P49524 N(6)-Monobutyryladenosine 337.1384 16.161e-13
P49873 Stemaphylline 279.2251 17.83e-11
P50234 Triptregeline H 611.2407 13.868e-12
P50354 Nodulisporic acid C2 701.4348 18.184e-14
P50462 Fungicide K 99-5278B 564.3682 14.433e-11
P50563 Glabrin A 175.0844 12.818e-11
P50639 Aquilegioside F 842.4681 12.372e-15
P50823 7,8-Dihydrovomifoliol 9-[rhamnosyl-(1->6)-glucoside] 534.2672 15.323e-11
P50908 No candidate annotation 670.3678 13.229e-11
P50955 No candidate annotation 295.2211 18.806e-11