Overview Annotation GWAS Evidence Associated genes

P50639

Metabolite ID
P50639
Deionized mass
842.4681 Da
Average m/z
843.4812
Average RT
27.0242
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.591e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.679e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.123e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.115e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.702e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.591e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.591e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.541e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.995e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.031e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.372e-15
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.372e-15
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.924e-12
Glyma.14G201500 hypothetical protein AT1G06950:TIC110:translocon at the inner envelope membrane of chloroplasts 110 1Chr14:46688725–46696028 (+)2.117e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.356e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.807e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.807e-11