P50908
Metabolite ID
P50908
Deionized mass
670.3678 Da
Average m/z
671.3788
Average RT
27.2331
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
112
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
112 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G183700 | Fasciclin-like arabinogalactan protein 19 | NA | 3 | Chr08:14738283–14742033 (+) | 2.208e-13 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 3 | Chr16:35170253–35173950 (-) | 2.743e-13 | |
| Glyma.01G126800 | hypothetical protein | NA | 2 | Chr01:43602195–43612710 (+) | 7.189e-11 | |
| Glyma.06G183500 | hypothetical protein | AT5G50000:AT5G50000:Protein kinase superfamily protein | 2 | Chr06:15828917–15834067 (+) | 6.624e-13 | |
| Glyma.08G182400 | hypothetical protein | NA | 2 | Chr08:14625596–14626713 (+) | 1.821e-12 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 8.631e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 4.756e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 4.756e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 1.154e-12 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 3.833e-12 | |
| Glyma.19G029600 | hypothetical protein | NA | 2 | Chr19:3681517–3690884 (-) | 5.624e-16 | |
| Glyma.19G029800 | hypothetical protein | NA | 2 | Chr19:3724518–3729860 (-) | 4.648e-12 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 2.905e-11 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 1.158e-13 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 5.889e-13 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 8.36e-11 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 8.36e-11 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 8.36e-11 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 8.36e-11 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 8.36e-11 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 8.36e-11 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 8.36e-11 | |
| Glyma.01G126900 | hypothetical protein | NA | 1 | Chr01:43632082–43635399 (+) | 7.189e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 5.339e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 4.421e-15 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 1.3e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 7.668e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 2.53e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 3.202e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.944e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.944e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.609e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 6.421e-12 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 6.421e-12 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 6.421e-12 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.918e-12 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.772e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.113e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 8.446e-15 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.347e-15 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 3.509e-11 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 1.283e-11 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 1.283e-11 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 7.338e-13 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 1 | Chr07:1697119–1698666 (+) | 1.261e-12 | |
| Glyma.07G034300 | hypothetical protein | NA | 1 | Chr07:2701469–2717662 (-) | 5.767e-13 | |
| Glyma.07G087700 | hypothetical protein | AT3G24495:MSH7:MUTS homolog 7 | 1 | Chr07:8111751–8121053 (+) | 1.923e-11 | |
| Glyma.08G183400 | hypothetical protein | NA | 1 | Chr08:14710312–14717042 (-) | 2.126e-11 | |
| Glyma.08G183800 | hypothetical protein | NA | 1 | Chr08:14744295–14744525 (+) | 1.486e-11 | |
| Glyma.08G188000 | hypothetical protein | AT1G22930:AT1G22930:T-complex protein 11 | 1 | Chr08:15072032–15079757 (-) | 2.38e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 8.502e-11 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 9.404e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 2.204e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.344e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 2.566e-13 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1 | Chr09:49863377–49871270 (+) | 3.392e-11 | |
| Glyma.10G028500 | hypothetical protein | NA | 1 | Chr10:2476846–2478953 (+) | 3.229e-11 | |
| Glyma.10G028700 | hypothetical protein | AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain | 1 | Chr10:2485817–2497071 (-) | 3.229e-11 | |
| Glyma.11G000700 | hypothetical protein | AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein | 1 | Chr11:33497–35198 (+) | 2.572e-11 | |
| Glyma.11G037100 | hypothetical protein | AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr11:2678678–2681764 (-) | 4.019e-12 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 5.979e-14 | |
| Glyma.11G048600 | hypothetical protein | AT5G67470:FH6:formin homolog 6 | 1 | Chr11:3634128–3639401 (-) | 1.739e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.956e-14 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.71e-13 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.71e-13 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.71e-13 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.71e-13 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.58e-12 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.58e-12 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.58e-12 | |
| Glyma.11G183200 | hypothetical protein | AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein | 1 | Chr11:25070908–25075185 (-) | 1.203e-11 | |
| Glyma.11G183800 | hypothetical protein | AT5G22450:AT5G22450:spectrin beta chain, brain | 1 | Chr11:25162867–25173439 (-) | 9.066e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 2.173e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 2.173e-11 | |
| Glyma.13G133800 | hypothetical protein | AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 | 1 | Chr13:24601574–24606756 (-) | 3.053e-11 | |
| Glyma.13G133900 | hypothetical protein | NA | 1 | Chr13:24613843–24616128 (+) | 3.053e-11 | |
| Glyma.13G134000 | hypothetical protein | NA | 1 | Chr13:24618272–24619048 (-) | 3.053e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 8.631e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 3.508e-13 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 3.508e-13 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 4.756e-14 | |
| Glyma.14G011900 | hypothetical protein | AT5G55960:AT5G55960:transmembrane protein C9orf5 protein | 1 | Chr14:902341–905336 (-) | 5.007e-11 | |
| Glyma.14G150000 | hypothetical protein | AT1G21830:AT1G21830:uncharacterized protein | 1 | Chr14:32314092–32316626 (+) | 5.433e-11 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 2.213e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 1.457e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 2.214e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 1.457e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 1.457e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.687e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.982e-12 | |
| Glyma.16G003000 | hypothetical protein | AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein | 1 | Chr16:164584–168767 (+) | 5.545e-11 | |
| Glyma.16G003200 | hypothetical protein | NA | 1 | Chr16:172940–178668 (-) | 5.545e-11 | |
| Glyma.16G019400 | SHAT1-5 | NAC domain-containing protein 43-like | NA | 1 | Chr16:1725643–1728272 (+) | 5.529e-12 |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 7.709e-14 | |
| Glyma.16G028100 | hypothetical protein | AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | 1 | Chr16:2725294–2733429 (-) | 9.988e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 1.849e-12 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 1.701e-11 |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 4.434e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 4.434e-12 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 8.256e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 2.533e-15 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 1.618e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 9.861e-12 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 2.633e-12 | |
| Glyma.19G009000 | hypothetical protein | AT5G14780:FDH:formate dehydrogenase | 1 | Chr19:860974–865476 (+) | 6.949e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1134716–1143232 (+) | 6.417e-11 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 1 | Chr19:1148510–1149495 (+) | 4.366e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 7.805e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 7.805e-11 | |
| Glyma.19G030100 | hypothetical protein | NA | 1 | Chr19:3732644–3733945 (+) | 8.272e-11 | |
| Glyma.19G030500 | GmAT133 | NA | 1 | Chr19:3779017–3781453 (-) | 8.272e-11 | |
| Glyma.19G031100 | hypothetical protein | AT3G02170:LNG2:longifolia2 | 1 | Chr19:3839225–3845784 (-) | 5.344e-11 |